non-proteinogenic amino acid

IRI: https://spec.industrialontologies.org/ontology/construct/NonProteinogenicAminoAcid

Defined In: https://spec.industrialontologies.org/ontology/biopharma/MolecularEntity/

SubClass Of: amino acid

Class Hierarchy

owl:Thing › bfo:entity › bfo:continuant › bfo:independent continuant › bfo:material entity › molecular entity › organic molecular entity › amino acid › non-proteinogenic amino acid

Definition

amino acid that is not normally incorporated into polypeptide chains by ribosomal translation

Examples

• Ornithine; Citrulline; β-alanine; 4-hydroxyproline

Adapted From

• https://www.ebi.ac.uk/chebi/CHEBI:83820

Primitive Class

This class is declared primitive and it does not have necessary and sufficient condiftions defined.

Primitive Rationale

See the primitive rationale under molecular entity

Formal Axioms

First-Order Logic Axioms

NonProteinogenicAminoAcid(x) → AminoAcid(x)

Semi-Formal Natural Language Axioms

if x is a ‘non-proteinogenic amino acid’ then x is an ‘amino acid’

Description Logic

constr:NonProteinogenicAminoAcid ⊑ constr:AminoAcid

SubClassOf: constr:AminoAcid